cBioPortal for Cancer Genomics
Science and medicineAid discovery in complex cancer genomics data
Get involved
Links from the organization’s published listing (2026). Older contact links may have moved.
Proposal examples
Browse the proposal library →Outcomes are reported by the linked archives.
- 2025 · acceptedcBioPortal rishisulakhe ↗
Programs & participation
8 records across 1 programIndexed project records; missing years are not zero. Coverage
2026Google Summer of CodeAnnual program · 5 projects indexed
- AI-Assisted Curation Assistant Tool for cBioPortal
- Automated Clinical Metadata Harmonization Dashboard
- Enhance 3D Protein Structure Viewer in cBioPortal using AlphaFold Data
- Enhance Similarity Maps (Embeddings) Visualization
- MCP Apps: Interactive Genomic Visualisations for AI Clients
Source checked Sep 28, 2026
Participation imported from the GSoC Organizations archive snapshot; this historical listing is not an application-status claim.
2025Google Summer of CodeAnnual program · 3 projects indexed
- AI/LLM Generated gene alteration and expression based subtyping for each tumor type
- Automated Metadata Harmonization Tool
- Show Variant Allele Frequency on the Plots Tab and OncoPrint
Source checked Sep 28, 2026
Participation imported from the GSoC Organizations archive snapshot; this historical listing is not an application-status claim.
2024Google Summer of CodeAnnual program · 9 projects indexed
- Add the ability to spawn code notebooks from cBioPortal queries
- Automated Curation and Harmonization of cBioPortal Clinical Metadata using Sentence Transformers
- Chatbot trained on documentation site and conversations
- Create pipeline/interface to prioritize variants for OncoKB curation
- Extend Chart Types in Study View
- Frontend visualization and incorporation of single cell data in cBioPortal
- Improve navigatability of the HTAN data standards
- Integration of AlphaMissense Pathogenicity Predictions into Genome Nexus and cBioPortal
- Visualize OncoKB annotation and patient report generation
Source checked Sep 28, 2026
Participation imported from the GSoC Organizations archive snapshot; this historical listing is not an application-status claim.
2023Google Summer of CodeAnnual program · 6 projects indexed
- Add Mutation Diagram on Study View for Enhanced Mutation Analysis
- Automating Quality Control of Datahub Submissions
- Create a clinical trial curation tool based on CTML from MatchMiner
- Group Comparison - Generic Assay Categorical and Binary data implementation
- Pathway Improvements in cBioPortal
- Proposal_Interactive web tour_Biqing Su
Source checked Sep 28, 2026
Participation imported from the GSoC Organizations archive snapshot; this historical listing is not an application-status claim.
2022Google Summer of CodeAnnual program · 2 projects indexed
Source checked Sep 28, 2026
Participation imported from the GSoC Organizations archive snapshot; this historical listing is not an application-status claim.
2019Google Summer of CodeAnnual program · 6 projects indexed
- Addition of novel CPTAC proteogenomic datasets to the cBioPortal
- Clonal evolution visualization web-tools
- ETL pipeline development for TCGA data from GDC Portal
- Integrating PathwayMapper into cBioPortal and Separating the Network View as a standalone module
- OncoKB Analysis in Study View
- Spark and Parquet Backend for cBioPortal Web API
Source checked Sep 28, 2026
Participation imported from the GSoC Organizations archive snapshot; this historical listing is not an application-status claim.
2017Google Summer of CodeAnnual program · 6 projects indexed
- Collaborative construction of cancer pathways with PathwayMapper
- Implement a Pipeline to Extract and Transform GDC Data
- Improved genome overview in patient view page.
- Integrating MolecularMatch clinical trials data into cBioPortal
- Standardizing clinical data from cBioPortal to for easier comparison and analysis
- Visualizing circulating tumor DNA results in the cBioPortal patient view
Source checked Sep 28, 2026
Participation imported from the GSoC Organizations archive snapshot; this historical listing is not an application-status claim.
2016Google Summer of CodeAnnual program · 5 projects indexed
- Build a web service and auto updating pipeline to provide 3D structure alignments for BioPortal
- Improving the clinical timeline of cBioPortal's patient view
- Integration of Proteomics Data to cBioPortal
- Onco Query Language (OQL) editor
- Prototype Plugin framework for Authentication
Source checked Sep 28, 2026
Participation imported from the GSoC Organizations archive snapshot; this historical listing is not an application-status claim.